Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs71373188 | chr16:20441565 | T/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs71373189 | chr16:20441705 | G/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs71384448 | chr16:20440426 | A/T | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs71384449 | chr16:20440586 | A/T | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs71384450 | chr16:20448351 | C/T | 0.000407 | 211 | 15.88 | 13.6 | 5.88 | KM Plot |
| KIRP | rs71384451 | chr16:20449439 | C/T | 0.000407 | 211 | 15.88 | 13.6 | 5.88 | KM Plot |
| KIRP | rs71384452 | chr16:20450143 | G/A | 0.000407 | 211 | 15.88 | 13.6 | 5.88 | KM Plot |
| KIRP | rs71384453 | chr16:20450223 | G/A | 0.000407 | 211 | 15.88 | 13.6 | 5.88 | KM Plot |
| KIRP | rs7143741 | chr14:59873032 | A/T | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
| KIRP | rs7148525 | chr14:96072287 | A/C | 1.4E-6 | 210 | 15.07 | 18.65 | 9.77 | KM Plot |
| KIRP | rs71488049 | chr10:102003192 | A/C | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs71488050 | chr10:102025574 | G/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs71488052 | chr10:102039401 | C/T | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs71488053 | chr10:102044312 | G/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs71488054 | chr10:102049303 | T/A | 5.7E-6 | 213 | 15.88 | 19.83 | 3.6 | KM Plot |